Image_1_Isolation, Identification, and Complete Genome Assembly of an Endophytic Bacillus velezensis YB-130, Potential Biocontrol Agent Against Fusarium graminearum.TIF
Wheat scab caused by F. graminearum is a highly destructive disease that leads to yield reduction and mycotoxin contamination of grains. In this study, an endophytic bacterium of strain YB-130 was isolated from surface sterilized wheat spikes with scab symptoms and identified as Bacillus velezensis by whole genome annotation, 16S rRNA gene and average nucleotide identities analysis. The whole-genome sequence of strain YB-130 was obtained by PacBio sequencing. 88 putative Carbohydrate-Active Enzymes and 12 gene clusters encoding for secondary metabolites were identified in the YB-130 genome, including one gene cluster for the synthesis of lanthipeptide only found in strain YB-130 genome. In dual cultures, strain YB-130 significantly inhibited the growth of F. graminearum PH-1 and other eight fungal plant pathogens, indicating a broad antifungal activity. Furthermore, strain YB-130 was able to significantly inhibit spore morphology and hyphal development of F. graminearum PH-1. Strain YB-130 also reduced deoxynivalenol production by F. graminearum PH-1 in dual cultures, possibly due to its ability to suppress the expression of tri5, tri3, and tri8 that are required for deoxynivalenol production in F. graminearum. Overall, B. velezensis YB-130 is a promising biological control agent of both F. graminearum infection and mycotoxin production.
History
References
- https://doi.org//10.1186/1475-2859-8-63
- https://doi.org//10.1080/09583150600937006
- https://doi.org//10.3389/fmicb.2019.01978
- https://doi.org//10.1186/s12866-015-0573-7
- https://doi.org//10.1093/nar/gkz310
- https://doi.org//10.3389/fmicb.2019.00302
- https://doi.org//10.1186/1471-2105-13-238
- https://doi.org//10.1371/journal.pone.0198560
- https://doi.org//10.1146/annurev-phyto-082718-100318
- https://doi.org//10.1038/nmeth.2474
- https://doi.org//10.1002/9780471729259.mca03cs00
- https://doi.org//10.1093/bioinformatics/btm009
- https://doi.org//10.1016/j.cropro.2016.10.002
- https://doi.org//10.1111/mpp.12618
- https://doi.org//10.1093/nar/gkr367
- https://doi.org//10.1126/science.aap7999
- https://doi.org//10.1038/nchembio.2007.5
- https://doi.org//10.1094/phyto-95-1397
- https://doi.org//10.3390/toxins11050295
- https://doi.org//10.1080/07060661.2018.1564792
- https://doi.org//10.1128/AEM.00639-06
- https://doi.org//10.1094/MPMI.2002.15.11.1119
- https://doi.org//10.5483/bmbrep.2005.38.1.082
- https://doi.org//10.1016/j.bcab.2017.01.003
- https://doi.org//10.1111/j.1574-6968.2008.01235.x
- https://doi.org//10.1016/j.scitotenv.2016.09.009
- https://doi.org//10.1101/gr.215087.116
- https://doi.org//10.1128/jb.186.4.1084-1096.2004
- https://doi.org//10.1006/jcis.1998.5558
- https://doi.org//10.1101/gr.092759.109
- https://doi.org//10.1093/molbev/msw054
- https://doi.org//10.1093/nar/gkm160
- https://doi.org//10.1038/nmeth.1923
- https://doi.org//10.5423/PPJ.OA.11.2013.0107
- https://doi.org//10.5423/PPJ.FT.06.2017.0126
- https://doi.org//10.1099/ijsem.0.003666
- https://doi.org//10.1006/meth.2001.1262
- https://doi.org//10.1093/nar/gkt1178
- https://doi.org//10.1093/nar/25.5.955
- https://doi.org//10.1111/j.1574-6976.2001.tb00579.x
- https://doi.org//10.1128/aem.68.6.2959-2964.2002
- https://doi.org//10.1128/aem.62.2.353-359.1996
- https://doi.org//10.1094/PDIS.1997.81.12.1340
- https://doi.org//10.1094/MPMI-04-12-0081-R
- https://doi.org//10.1038/nrg.2017.82
- https://doi.org//10.2174/1389557519666191205124050
- https://doi.org//10.1016/j.micres.2016.06.002
- https://doi.org//10.1016/j.cropro.2007.03.004
- https://doi.org//10.1007/s12550-015-0224-8
- https://doi.org//10.1016/s2095-3119(18)61929-x
- https://doi.org//10.1111/j.1365-3059.1995.tb02773.x
- https://doi.org//10.1038/nmeth.1701
- https://doi.org//10.1073/pnas.0906412106
- https://doi.org//10.4014/jmb.1804.04025
- https://doi.org//10.1038/s41559-018-0793-y
- https://doi.org//10.1093/jxb/erp058
- https://doi.org//10.1007/s10658-015-0636-5
- https://doi.org//10.1016/j.plantsci.2017.11.012
- https://doi.org//10.1186/s41938-020-0209-6
- https://doi.org//10.1038/srep12975
- https://doi.org//10.3389/fmicb.2016.01115
- https://doi.org//10.1007/s11274-015-1985-0
- https://doi.org//10.1016/j.biocontrol.2014.12.010
- https://doi.org//10.1007/s00253-015-6604-3
- https://doi.org//10.1007/s10482-017-0844-4
- https://doi.org//10.1016/j.ijfoodmicro.2007.07.033
- https://doi.org//10.1093/nar/gky418
- https://doi.org//10.1016/j.jbiotec.2014.11.033
- https://doi.org//10.1371/journal.pone.0092486