Data_Sheet_1_A Meta-Population Model of Potential Foot-and-Mouth Disease Transmission, Clinical Manifestation, and Detection Within U.S. Beef Feedlots.docx

Foot-and-mouth disease (FMD) has not been reported in the U.S. since 1929. Recent outbreaks in previously FMD-free countries raise concerns about potential FMD introductions in the U.S. Mathematical modeling is the only tool for simulating infectious disease outbreaks in non-endemic territories. In the majority of prior studies, FMD virus (FMDv) transmission on-farm was modeled assuming homogenous animal mixing. This assumption is implausible for U.S. beef feedlots which are divided into multiple home-pens without contact between home-pens except fence line with contiguous home-pens and limited mixing in hospital pens. To project FMDv transmission and clinical manifestation in a feedlot, we developed a meta-population stochastic model reflecting the contact structure. Within a home-pen, the dynamics were represented assuming homogenous animal mixing by a modified SLIR (susceptible-latent-infectious-recovered) model with four additional compartments tracing cattle with subclinical or clinical FMD and infectious status. Virus transmission among home-pens occurred via cattle mixing in hospital-pen(s), cowboy pen rider movements between home-pens, airborne, and for contiguous home-pens fence-line and via shared water-troughs. We modeled feedlots with a one-time capacity of 4,000 (small), 12,000 (medium), and 24,000 (large) cattle. Common cattle demographics, feedlot layout, endemic infectious and non-infectious disease occurrence, and production management were reflected. Projected FMD-outbreak duration on a feedlot ranged from 49 to 82 days. Outbreak peak day (with maximum number of FMD clinical cattle) ranged from 24 (small) to 49 (large feedlot). Detection day was 4–12 post-FMD-introduction with projected 28, 9, or 4% of cattle already infected in a small, medium, or large feedlot, respectively. Depletion of susceptible cattle in a feedlot occurred by day 23–51 post-FMD-introduction. Parameter-value sensitivity analyses were performed for model outputs. Detection occurred sooner if there was a higher initial proportion of latent animals in the index home-pen. Shorter outbreaks were associated with a shorter latent period and higher bovine respiratory disease morbidity (impacting the in-hospital-pen cattle mixing occurrence). This first model of potential FMD dynamics on U.S. beef feedlots shows the importance of capturing within-feedlot cattle contact structure for projecting infectious disease dynamics. Our model provides a tool for evaluating FMD outbreak control strategies.