10.3389/fpls.2019.00745.s005
Li Li
Li
Li
Xinlei Yang
Xinlei
Yang
Shunli Cui
Shunli
Cui
Xinhao Meng
Xinhao
Meng
Guojun Mu
Guojun
Mu
Mingyu Hou
Mingyu
Hou
Meijing He
Meijing
He
Hui Zhang
Hui
Zhang
Lifeng Liu
Lifeng
Liu
Charles Y. Chen
Charles Y.
Chen
Image_3_Construction of High-Density Genetic Map and Mapping Quantitative Trait Loci for Growth Habit-Related Traits of Peanut (Arachis hypogaea L.).jpg
Frontiers
2019
cultivated peanut (Arachis hypogaea L.)
high-density genetic map
SLAF-seq
QTL mapping
plant growth habit
2019-06-12 04:19:41
Figure
https://frontiersin.figshare.com/articles/figure/Image_3_Construction_of_High-Density_Genetic_Map_and_Mapping_Quantitative_Trait_Loci_for_Growth_Habit-Related_Traits_of_Peanut_Arachis_hypogaea_L_jpg/8260445
<p>Plant growth habit is an important and complex agronomic trait and is associated with yield, disease resistance, and mechanized harvesting in peanuts. There are at least two distinct growth habits (erect and prostrate) and several intermediate forms existing in the peanut germplasm. A recombinant inbred line population containing 188 individuals was developed from a cross of “Jihua 5” and “M130” for genetically dissecting the architecture of the growth habit. A new high-density genetic linkage map was constructed by using specific locus amplified fragment sequencing technology. The map contains 2,808 single-nucleotide polymorphism markers distributed on 20 linkage groups with a total length of 1,308.20 cM and an average inter-marker distance of 0.47 cM. The quantitative trait locus (QTL) analysis of the growth habit-related traits was conducted based on phenotyping data from seven environments. A total of 39 QTLs for growth habit-related traits was detected on 10 chromosomes explaining 4.55–27.74% of the phenotypic variance, in which 6 QTLs were for lateral branch angle, 8 QTLs were for extent radius, 7 QTLs were for the index of plant type, 11 QTLs were for main stem height, and 7 QTLs were for lateral branch length. Among these QTLs, 12 were co-localized on chromosome B05 spanning an approximately 0.17 Mb physical interval in comparison with the allotetraploid reference genome of “Tifrunner.” Analysis of the co-localized genome region has shown that the putative genes are involved in light and hormones and will facilitate peanut growth habit molecular breeding and study of peanut domestication.</p>